BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A12LP1|AL425973
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1595 0.0
>3x_Contig1668
Length = 13429
Score = 1595 bits (804), Expect = 0.0
Identities = 812/814 (99%), Gaps = 1/814 (0%)
Strand = Plus / Plus
Query: 1 tcaatagcaaattcagcaacgatgcgctaaagaagcaactgcracacaatgtgatcaatc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2905 tcaatagcaaattcagcaacgatgcgctaaagaagcaactgcgacacaatgtgatcaatc 2964
Query: 61 tggatgaaaaatcttctcatatggttaacgaagtgccctgttactgacgaatctcttgac 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2965 tggatgaaaaatcttctcatatggttaacgaagtgcc-tgttactgacgaatctcttgac 3023
Query: 121 ctgtttttggaacaatatgttaatgagcgcacagaatatcacctacagcgagaaaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 ctgtttttggaacaatatgttaatgagcgcacagaatatcacctacagcgagaaaaattg 3083
Query: 181 gcaacatgggaacaacaggatactttgagattaccatgagtgtagtgcattattgattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 gcaacatgggaacaacaggatactttgagattaccatgagtgtagtgcattattgattat 3143
Query: 241 tgatgttattatgtaaaatacatagattttgatttttaagagtgtattaagcattaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 tgatgttattatgtaaaatacatagattttgatttttaagagtgtattaagcattaaatc 3203
Query: 301 gtgtttaaaatgactgctatcttatgccattccaaatgcaaacttgaccatcccagccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 gtgtttaaaatgactgctatcttatgccattccaaatgcaaacttgaccatcccagccag 3263
Query: 361 tcgaagcaacaaagcctggcgtaccccataaactccaatctgctccaaaaacgaactcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 tcgaagcaacaaagcctggcgtaccccataaactccaatctgctccaaaaacgaactcgg 3323
Query: 421 aatgctccataaatatgaatctacaaccatgggctggatcaatgctattcgttttcccgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 aatgctccataaatatgaatctacaaccatgggctggatcaatgctattcgttttcccgg 3383
Query: 481 tcagcccatgaccatcatcacttagatctgtccaaactctgcacgtcatatcatatgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 tcagcccatgaccatcatcacttagatctgtccaaactctgcacgtcatatcatatgatg 3443
Query: 541 ttgaaagtaacatgttactatgatgaggtgaccatgtcacttttctaacggctaattcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 ttgaaagtaacatgttactatgatgaggtgaccatgtcacttttctaacggctaattcat 3503
Query: 601 ggccttgaatttcattaatgttgattggttgatgtccttgtgacagcatttttctgcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 ggccttgaatttcattaatgttgattggttgatgtccttgtgacagcatttttctgcaca 3563
Query: 661 ttctcaaatcccatacttttatcatcttatccactccacccgtagcaattatatgaggtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 ttctcaaatcccatacttttatcatcttatccactccacccgtagcaattatatgaggtc 3623
Query: 721 tatatttgttaaaatcacaggtcaaggcttcaaatcccccatggccaagaaattgatgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 tatatttgttaaaatcacaggtcaaggcttcaaatcccccatggccaagaaattgatgtt 3683
Query: 781 gcggtaacccattattaggcacccttagatcgta 814
||||||||||||||||||||||||||||||||||
Sbjct: 3684 gcggtaacccattattaggcacccttagatcgta 3717
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5675
Number of Sequences: 1807
Number of extensions: 5675
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)